Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	OCM	HGNC:8105 (HGNC) 654231 (Entrez Gene) 164795 (OMIM) OCM (Alliance of Genome Resources)	Chr	Chr7:5859718-5886363 (+) GRCh38		P0CE72 (UniProt | EBI) NM_001097622 (RefSeq)
	OCM2	HGNC:34396 (HGNC) 4951 (Entrez Gene) 620522 (OMIM) OCM2 (Alliance of Genome Resources)	Chr7 q21.3	Chr7:97984687-97991169 (-) GRCh38		P0CE71 (UniProt | EBI) NM_006188 (RefSeq)
mouse	Ocm	MGI:97401 (MGI) 18261 (Entrez Gene) Gene Tree Ocm (Alliance of Genome Resources)	Chr5 82.85 cM	Chr5:143956622-143963488 (-) GRCm39		ENSMUSG00000029618 (Ensembl Gene Model) ENSMUSP00000031622 (Ensembl) ENSMUST00000031622 (Ensembl)
rat	Ocm	RGD:3222 (Rat Genome Database) 25503 (Entrez Gene) Ocm (Alliance of Genome Resources)	Chr12 p11			P02631 (UniProt | EBI) NM_012995 (RefSeq)
zebrafish	pvalb8	ZDB-GENE-030805-3 (Zebrafish Model Organism Database) 360208 (Entrez Gene) pvalb8 (Alliance of Genome Resources)	Chr3			NP_891982 (RefSeq) NM_182937 (RefSeq)
	pvalb9	ZDB-GENE-030805-4 (Zebrafish Model Organism Database) 360209 (Entrez Gene) pvalb9 (Alliance of Genome Resources)	Chr12			NP_891983 (RefSeq) NM_182938 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.