Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	LAMP2	HGNC:6501 (HGNC) 3920 (Entrez Gene) 309060 (OMIM) LAMP2 (Alliance of Genome Resources)	ChrX q24	ChrX:120426148-120469365 (-) GRCh38	Danon disease hypertrophic cardiomyopathy	P13473 (UniProt | EBI) NM_013995 (RefSeq)
mouse	Lamp2	MGI:96748 (MGI) 16784 (Entrez Gene) Gene Tree Lamp2 (Alliance of Genome Resources)	ChrX 22.67 cM	ChrX:37490234-37545331 (-) GRCm39	Danon disease	ENSMUSG00000016534 (Ensembl Gene Model) ENSMUSP00000074448 (Ensembl) ENSMUST00000074913 (Ensembl)
rat	Lamp2	RGD:2990 (Rat Genome Database) 24944 (Entrez Gene) Lamp2 (Alliance of Genome Resources)	ChrX q35			P17046 (UniProt | EBI) NM_017068 (RefSeq)
zebrafish	lamp2	ZDB-GENE-030729-9 (Zebrafish Model Organism Database) 541406 (Entrez Gene) lamp2 (Alliance of Genome Resources)	Chr14			NP_001013551 (RefSeq) NM_001013533 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.