Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SLC1A4	HGNC:10942 (HGNC) 6509 (Entrez Gene) 600229 (OMIM) SLC1A4 (Alliance of Genome Resources)	Chr2 p14	Chr2:64988477-65023865 (+) GRCh38		P43007 (UniProt | EBI) NM_001348407 (RefSeq)
mouse	Slc1a4	MGI:2135601 (MGI) 55963 (Entrez Gene) Gene Tree Slc1a4 (Alliance of Genome Resources)	Chr11 12.97 cM	Chr11:20252180-20282713 (-) GRCm39	spastic tetraplegia, thin corpus callosum, and progressive microcephaly	55963 (NCBI Gene Model) O35874 (UniProt | EBI) NM_018861 (RefSeq)
rat	Slc1a4	RGD:735146 (Rat Genome Database) 305540 (Entrez Gene) Slc1a4 (Alliance of Genome Resources)	Chr14 q22			NP_942058 (RefSeq) NM_198763 (RefSeq)
zebrafish	slc1a4	ZDB-GENE-030616-566 (Zebrafish Model Organism Database) 368885 (Entrez Gene) slc1a4 (Alliance of Genome Resources)	Chr13			NP_001002513 (RefSeq) NM_001002513 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.