Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SLC17A2	HGNC:10930 (HGNC) 10246 (Entrez Gene) 611049 (OMIM) SLC17A2 (Alliance of Genome Resources)	Chr6 p22.2	Chr6:25912754-25930691 (-) GRCh38		O00624 (UniProt | EBI) NM_005835 (RefSeq)
mouse	Slc17a2	MGI:2443098 (MGI) 218103 (Entrez Gene) Gene Tree Slc17a2 (Alliance of Genome Resources)	Chr13 9.94 cM	Chr13:23990976-24009163 (+) GRCm39		ENSMUSG00000036110 (Ensembl Gene Model) ENSMUSP00000097288 (Ensembl) ENSMUST00000099697 (Ensembl)
rat	Slc17a2	RGD:1308821 (Rat Genome Database) 306950 (Entrez Gene) Slc17a2 (Alliance of Genome Resources)	Chr17 p11			NP_001100823 (RefSeq) NM_001107353 (RefSeq)
zebrafish	si:ch1073-513e17.1	ZDB-GENE-030131-7188 (Zebrafish Model Organism Database) 571066 (Entrez Gene) si:ch1073-513e17.1 (Alliance of Genome Resources)	Chr19			XP_021323860 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.