Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	COL20A1	HGNC:14670 (HGNC) 57642 (Entrez Gene) 619390 (OMIM) COL20A1 (Alliance of Genome Resources)	Chr20 q13.33	Chr20:63293186-63334851 (+) GRCh38		Q9P218 (UniProt | EBI) NM_020882 (RefSeq)
mouse	Col20a1	MGI:1920618 (MGI) 73368 (Entrez Gene) Gene Tree Col20a1 (Alliance of Genome Resources)	Chr2 103.53 cM	Chr2:180628328-180660156 (+) GRCm39		ENSMUSG00000016356 (Ensembl Gene Model) ENSMUSP00000104484 (Ensembl) ENSMUST00000108856 (Ensembl)
rat	Col20a1	RGD:1563901 (Rat Genome Database) 311716 (Entrez Gene) Col20a1 (Alliance of Genome Resources)	Chr3 q43			NP_001414633 (RefSeq) NM_001427704 (RefSeq)
zebrafish	slc35c2	ZDB-GENE-030131-2202 (Zebrafish Model Organism Database) 323482 (Entrez Gene) slc35c2 (Alliance of Genome Resources)	Chr23			NP_997808 (RefSeq) NM_212643 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.