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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TCAF2 HGNC:26878 (HGNC)
285966 (Entrez Gene)
616252 (OMIM)
TCAF2 (Alliance of Genome Resources)
Chr7 q35 Chr7:143620952-143730410 (+)
GRCh38
A6NFQ2 (UniProt | EBI)
NM_001365427 (RefSeq)
TCAF2C HGNC:53641 (HGNC)
100533814 (Entrez Gene)
TCAF2C (Alliance of Genome Resources)
Chr Chr7:143639230-143647647 (-)
GRCh38
mouse Tcaf2 MGI:2385258 (MGI)
232748 (Entrez Gene)
Gene Tree
Tcaf2 (Alliance of Genome Resources)
Chr6 20.82 cM Chr6:42599950-42622134 (-)
GRCm39
232748 (NCBI Gene Model)
Q921K8 (UniProt | EBI)
NM_146174 (RefSeq)
rat Tcaf2c RGD:1591778 (Rat Genome Database)
100912416 (Entrez Gene)
Tcaf2c (Alliance of Genome Resources)
Chr4 XP_063143015 (RefSeq)
zebrafish si:ch211-210b2.2 ZDB-GENE-131118-33 (Zebrafish Model Organism Database)
100535998 (Entrez Gene)
si:ch211-210b2.2 (Alliance of Genome Resources)
Chr15 XP_009289632 (RefSeq)
si:ch211-210b2.3 ZDB-GENE-131122-13 (Zebrafish Model Organism Database)
555689 (Entrez Gene)
si:ch211-210b2.3 (Alliance of Genome Resources)
Chr15 XP_683371 (RefSeq)
si:ch211-210b2.4 ZDB-GENE-131122-12 (Zebrafish Model Organism Database)
100535908 (Entrez Gene)
si:ch211-210b2.4 (Alliance of Genome Resources)
Chr15 XP_017206609 (RefSeq)
zgc:162193 ZDB-GENE-030131-2035 (Zebrafish Model Organism Database)
323315 (Entrez Gene)
zgc:162193 (Alliance of Genome Resources)
Chr15 A4IG42 (UniProt | EBI)
NM_001089327 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory