Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CAPN9	HGNC:1486 (HGNC) 10753 (Entrez Gene) 606401 (OMIM) CAPN9 (Alliance of Genome Resources)	Chr1 q42.2	Chr1:230747384-230802003 (+) GRCh38	stomach cancer	O14815 (UniProt | EBI) NM_006615 (RefSeq)
mouse	Capn9	MGI:1920897 (MGI) 73647 (Entrez Gene) Gene Tree Capn9 (Alliance of Genome Resources)	Chr8 72.81 cM	Chr8:125302850-125345470 (+) GRCm39		ENSMUSG00000031981 (Ensembl Gene Model) ENSMUSP00000090717 (Ensembl) ENSMUST00000093033 (Ensembl)
rat	Capn9	RGD:70965 (Rat Genome Database) 116694 (Entrez Gene) Capn9 (Alliance of Genome Resources)	Chr19 q12			O35920 (UniProt | EBI) NM_001271140 (RefSeq)
zebrafish	capn9	ZDB-GENE-010724-2 (Zebrafish Model Organism Database) 445107 (Entrez Gene) capn9 (Alliance of Genome Resources)	Chr1			NP_001003501 (RefSeq) NM_001003501 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.