Vertebrate Homology

• Source: Alliance of Genome Resources

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Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	OR10J3	HGNC:14992 (HGNC) 441911 (Entrez Gene) OR10J3 (Alliance of Genome Resources)	Chr1 q23.2	Chr1:159313570-159314759 (-) GRCh38		Q5JRS4 (UniProt | EBI) NM_001004467 (RefSeq)
mouse	Or10j3b	MGI:3031238 (MGI) 258881 (Entrez Gene) Gene Tree Or10j3b (Alliance of Genome Resources)	Chr1 80.33 cM	Chr1:173043174-173044207 (+) GRCm39		258881 (NCBI Gene Model) NP_667092 (RefSeq) NM_146881 (RefSeq)
rat	Or10j3b	RGD:1333448 (Rat Genome Database) 289241 (Entrez Gene) Or10j3b (Alliance of Genome Resources)	Chr13 q24			NP_001000080 (RefSeq) NM_001000080 (RefSeq)
zebrafish	or6at1	ZDB-GENE-990415-190 (Zebrafish Model Organism Database) 30356 (Entrez Gene) or6at1 (Alliance of Genome Resources)	Chr21			XP_009293935 (RefSeq)
	or15.37	ZDB-GENE-060929-72 (Zebrafish Model Organism Database) 767762 (Entrez Gene) or15.37 (Alliance of Genome Resources)	Chr15			NP_001070197 (RefSeq) NM_001076729 (RefSeq)
	or21.49	ZDB-GENE-091113-55 (Zebrafish Model Organism Database) 100151039 (Entrez Gene) or21.49 (Alliance of Genome Resources)	Chr21			XP_017208556 (RefSeq)
	or42a1	ZDB-GENE-070806-67 (Zebrafish Model Organism Database) 100151522 (Entrez Gene) or42a1 (Alliance of Genome Resources)	Chr10			NP_001122058 (RefSeq) NM_001128586 (RefSeq)
	or42a2	ZDB-GENE-070804-6 (Zebrafish Model Organism Database) 100149914 (Entrez Gene) or42a2 (Alliance of Genome Resources)	Chr10			NP_001124279 (RefSeq) NM_001130807 (RefSeq)
	or42a4	ZDB-GENE-070806-74 (Zebrafish Model Organism Database) 100148220 (Entrez Gene) or42a4 (Alliance of Genome Resources)	Chr10			NP_001124273 (RefSeq) NM_001130801 (RefSeq)
	or42a5	ZDB-GENE-070806-69 (Zebrafish Model Organism Database) 100148447 (Entrez Gene) or42a5 (Alliance of Genome Resources)	Chr10			NP_001122035 (RefSeq) NM_001128563 (RefSeq)
	or42a6	ZDB-GENE-070804-5 (Zebrafish Model Organism Database) 100149214 (Entrez Gene) or42a6 (Alliance of Genome Resources)	Chr10			NP_001122043 (RefSeq) NM_001128571 (RefSeq)
	or42a7	ZDB-GENE-070806-70 (Zebrafish Model Organism Database) 100151312 (Entrez Gene) or42a7 (Alliance of Genome Resources)	Chr10			NP_001124288 (RefSeq) NM_001130816 (RefSeq)
	or42a8	ZDB-GENE-070806-68 (Zebrafish Model Organism Database) 100147989 (Entrez Gene) or42a8 (Alliance of Genome Resources)	Chr10			NP_001124270 (RefSeq) NM_001130798 (RefSeq)
	or42a9	ZDB-GENE-070806-75 (Zebrafish Model Organism Database) 100148707 (Entrez Gene) or42a9 (Alliance of Genome Resources)	Chr10			XP_021329892 (RefSeq)
	or42b1	ZDB-GENE-070806-76 (Zebrafish Model Organism Database) 100150812 (Entrez Gene) or42b1 (Alliance of Genome Resources)	Chr10			NP_001121883 (RefSeq) NM_001128411 (RefSeq)
	or42b2	ZDB-GENE-990415-193 (Zebrafish Model Organism Database) 30358 (Entrez Gene) or42b2 (Alliance of Genome Resources)	Chr10			NP_571206 (RefSeq) NM_131131 (RefSeq)
	or42c1	ZDB-GENE-000329-14 (Zebrafish Model Organism Database) 58115 (Entrez Gene) or42c1 (Alliance of Genome Resources)	Chr15			NP_571667 (RefSeq) NM_131592 (RefSeq)
	or42c2	ZDB-GENE-000329-10 (Zebrafish Model Organism Database) 58103 (Entrez Gene) or42c2 (Alliance of Genome Resources)	Chr15			NP_001349357 (RefSeq) NM_131581 (RefSeq)
	or42c3	ZDB-GENE-010308-14 (Zebrafish Model Organism Database) 80364 (Entrez Gene) or42c3 (Alliance of Genome Resources)	Chr15			NP_571821 (RefSeq) NM_131746 (RefSeq)
	or42c4	ZDB-GENE-000329-15 (Zebrafish Model Organism Database) 58104 (Entrez Gene) or42c4 (Alliance of Genome Resources)	Chr15			NP_571657 (RefSeq) NM_131582 (RefSeq)
	or42c5	ZDB-GENE-010308-10 (Zebrafish Model Organism Database) 80362 (Entrez Gene) or42c5 (Alliance of Genome Resources)	Chr15			NP_571819 (RefSeq) NM_131744 (RefSeq)
	or42d1	ZDB-GENE-010308-17 (Zebrafish Model Organism Database) 80366 (Entrez Gene) or42d1 (Alliance of Genome Resources)	Chr15			NP_571823 (RefSeq) NM_131748 (RefSeq)
	or42d2	ZDB-GENE-010308-11 (Zebrafish Model Organism Database) 80363 (Entrez Gene) or42d2 (Alliance of Genome Resources)	Chr15			NP_571820 (RefSeq) NM_131745 (RefSeq)
	or42d3	ZDB-GENE-010308-16 (Zebrafish Model Organism Database) 80365 (Entrez Gene) or42d3 (Alliance of Genome Resources)	Chr15			NP_571822 (RefSeq) NM_131747 (RefSeq)
	or42e1	ZDB-GENE-000329-16 (Zebrafish Model Organism Database) 58116 (Entrez Gene) or42e1 (Alliance of Genome Resources)	Chr15			NP_571668 (RefSeq) NM_131593 (RefSeq)
	or42e2	ZDB-GENE-010308-12 (Zebrafish Model Organism Database) 80372 (Entrez Gene) or42e2 (Alliance of Genome Resources)	Chr15			NP_694517 (RefSeq) NM_152985 (RefSeq)
	or42e3	ZDB-GENE-010308-19 (Zebrafish Model Organism Database) 791954 (Entrez Gene) or42e3 (Alliance of Genome Resources)	Chr15			NP_001122244 (RefSeq) NM_001128772 (RefSeq)
	or70a2	ZDB-GENE-010309-1 (Zebrafish Model Organism Database) 80359 (Entrez Gene) or70a2 (Alliance of Genome Resources)	Chr21			NP_571816 (RefSeq) NM_131741 (RefSeq)
	or70a3	ZDB-GENE-070806-13 (Zebrafish Model Organism Database) 641416 (Entrez Gene) or70a3 (Alliance of Genome Resources)	Chr21			NP_001032482 (RefSeq) NM_001037405 (RefSeq)
	or70a4	ZDB-GENE-010309-3 (Zebrafish Model Organism Database) 80361 (Entrez Gene) or70a4 (Alliance of Genome Resources)	Chr21			NP_571818 (RefSeq) NM_131743 (RefSeq)
	or70a5	ZDB-GENE-091116-94 (Zebrafish Model Organism Database) 100331737 (Entrez Gene) or70a5 (Alliance of Genome Resources)	Chr21			XP_002666109 (RefSeq)
	or70a7	ZDB-GENE-091116-45 (Zebrafish Model Organism Database) 108180809 (Entrez Gene) or70a7 (Alliance of Genome Resources)	Chr21			XP_017208546 (RefSeq)
	or70a8	ZDB-GENE-070806-9 (Zebrafish Model Organism Database) 553541 (Entrez Gene) or70a8 (Alliance of Genome Resources)	Chr21			NP_001030339 (RefSeq) NM_001035262 (RefSeq)
	or70a11	ZDB-GENE-070806-12 (Zebrafish Model Organism Database) 100149635 (Entrez Gene) or70a11 (Alliance of Genome Resources)	Chr21			NP_001124278 (RefSeq) NM_001130806 (RefSeq)
	or70a12	ZDB-GENE-010309-2 (Zebrafish Model Organism Database) 80360 (Entrez Gene) or70a12 (Alliance of Genome Resources)	Chr21			NP_571817 (RefSeq) NM_131742 (RefSeq)
	or70a13	ZDB-GENE-070806-11 (Zebrafish Model Organism Database) 100151263 (Entrez Gene) or70a13 (Alliance of Genome Resources)	Chr21			NP_001122057 (RefSeq) NM_001128585 (RefSeq)
	or70a14	ZDB-GENE-081031-29 (Zebrafish Model Organism Database) 100534688 (Entrez Gene) or70a14 (Alliance of Genome Resources)	Chr21			XP_009293934 (RefSeq)
	or70a15	ZDB-GENE-070806-7 (Zebrafish Model Organism Database) 100150369 (Entrez Gene) or70a15 (Alliance of Genome Resources)	Chr21			NP_001121877 (RefSeq) NM_001128405 (RefSeq)
	or70a16	ZDB-GENE-070806-10 (Zebrafish Model Organism Database) 100148683 (Entrez Gene) or70a16 (Alliance of Genome Resources)	Chr21			NP_001122038 (RefSeq) NM_001128566 (RefSeq)
	or70a17	ZDB-GENE-070806-14 (Zebrafish Model Organism Database) 100093709 (Entrez Gene) or70a17 (Alliance of Genome Resources)	Chr21			NP_001092732 (RefSeq) NM_001099262 (RefSeq)
	or70b1	ZDB-GENE-990415-189 (Zebrafish Model Organism Database) 30294 (Entrez Gene) or70b1 (Alliance of Genome Resources)	Chr21			NP_571158 (RefSeq) NM_131083 (RefSeq)
	or70c1	ZDB-GENE-070806-8 (Zebrafish Model Organism Database) 678539 (Entrez Gene) or70c1 (Alliance of Genome Resources)	Chr21			NP_001035388 (RefSeq) NM_001040298 (RefSeq)
	or71al2	ZDB-GENE-010308-22 (Zebrafish Model Organism Database) 554777 (Entrez Gene) or71al2 (Alliance of Genome Resources)	Chr15			NP_001034711 (RefSeq) NM_001039622 (RefSeq)
	or71aq1	ZDB-GENE-070806-77 (Zebrafish Model Organism Database) 100150478 (Entrez Gene) or71aq1 (Alliance of Genome Resources)	Chr15			NP_001122049 (RefSeq) NM_001128577 (RefSeq)
	or71aq2	ZDB-GENE-070806-78 (Zebrafish Model Organism Database) 100149757 (Entrez Gene) or71aq2 (Alliance of Genome Resources)	Chr15			NP_001122045 (RefSeq) NM_001128573 (RefSeq)
	or71ar1	ZDB-GENE-070806-82 (Zebrafish Model Organism Database) 100151390 (Entrez Gene) or71ar1 (Alliance of Genome Resources)	Chr15			NP_001121889 (RefSeq) NM_001128417 (RefSeq)
	or109-6	ZDB-GENE-070804-7 (Zebrafish Model Organism Database) 100150635 (Entrez Gene) or109-6 (Alliance of Genome Resources)	Chr10			NP_001121881 (RefSeq) NM_001128409 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.