Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	HOXC9	HGNC:5130 (HGNC) 3225 (Entrez Gene) 142971 (OMIM) HOXC9 (Alliance of Genome Resources)	Chr12 q13.13	Chr12:53994895-54003337 (+) GRCh38		P31274 (UniProt | EBI) NM_006897 (RefSeq)
mouse	Hoxc9	MGI:96199 (MGI) 15427 (Entrez Gene) Gene Tree Hoxc9 (Alliance of Genome Resources)	Chr15 58.04 cM	Chr15:102885467-102893324 (+) GRCm39		15427 (NCBI Gene Model) P09633 (UniProt | EBI) NM_008272 (RefSeq)
rat	Hoxc9	RGD:1595784 (Rat Genome Database) 368178 (Entrez Gene) Hoxc9 (Alliance of Genome Resources)	Chr7 q36			NP_001094377 (RefSeq) NM_001100907 (RefSeq)
zebrafish	hoxc9a	ZDB-GENE-000328-5 (Zebrafish Model Organism Database) 58043 (Entrez Gene) hoxc9a (Alliance of Genome Resources)	Chr23			Q9YGS6 (UniProt | EBI) NM_131528 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.