Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ZRANB2
  • Mouse genes Zranb2
  • Rat genes Zranb2
  • Zfish genes zranb2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Zranb2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030882	lipid antigen binding	zranb2	IDA		Zfish	PMID:26740623
Molecular Function	GO:0001530	lipopolysaccharide binding	zranb2	IDA		Zfish	PMID:26740623
Molecular Function	GO:0005515	protein binding	ZRANB2	IPI	UniProtKB:Q02040	Human	PMID:16982639
Molecular Function	GO:0005515	protein binding	ZRANB2	IPI	UniProtKB:P32121	Human	PMID:17620599
Molecular Function	GO:0005515	protein binding	ZRANB2	IPI	UniProtKB:P49407	Human	PMID:17620599
Molecular Function	GO:0005515	protein binding	ZRANB2	IPI	UniProtKB:Q5S007	Human	PMID:23075850
Molecular Function	GO:0005515	protein binding	ZRANB2	IPI	UniProtKB:Q5S007	Human	PMID:29513927
Molecular Function	GO:0003723	RNA binding	ZRANB2	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	ZRANB2	HDA		Human	PMID:22681889
Cellular Component	GO:0005654	nucleoplasm	ZRANB2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Zranb2	IDA		Rat	PMID:15942958|RGD:1598733
Biological Process	GO:0042742	defense response to bacterium	zranb2	IDA		Zfish	PMID:26740623

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern