Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ZC3H13
  • Mouse genes Zc3h13
  • Rat genes Zc3h13
  • Zfish genes zc3h13
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Zc3h13

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	ZC3H13	IPI	UniProtKB:P0DPB3	Human	PMID:20195357
Molecular Function	GO:0003723	RNA binding	ZC3H13	HDA		Human	PMID:22681889
Cellular Component	GO:0016607	nuclear speck	ZC3H13	IDA		Human	PMID:24100041
Cellular Component	GO:0016607	nuclear speck	Zc3h13	IDA		Mouse	MGI:MGI:6158697|PMID:29547716
Cellular Component	GO:0005654	nucleoplasm	ZC3H13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	ZC3H13	IDA		Human	PMID:24100041
Cellular Component	GO:0036396	RNA N6-methyladenosine methyltransferase complex	ZC3H13	IPI		Human	PMID:29507755
Cellular Component	GO:0036396	RNA N6-methyladenosine methyltransferase complex	ZC3H13	IDA		Human	PMID:29507755
Cellular Component	GO:0036396	RNA N6-methyladenosine methyltransferase complex	Zc3h13	IDA		Mouse	MGI:MGI:6158697|PMID:29547716
Biological Process	GO:0080009	mRNA methylation	ZC3H13	IMP		Human	PMID:29507755
Biological Process	GO:0080009	mRNA methylation	Zc3h13	IDA		Mouse	MGI:MGI:6158697|PMID:29547716
Biological Process	GO:2000036	regulation of stem cell population maintenance	Zc3h13	IMP		Mouse	MGI:MGI:6158697|PMID:29547716

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern