Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes VTA1
  • Mouse genes Vta1
  • Rat genes Vta1
  • Zfish genes vta1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Vta1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q9NZZ3	Human	PMID:15644320
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q05516	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:O75351	Human	PMID:16193069
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q9NZZ3	Human	PMID:16730941
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:O43633	Human	PMID:18385515
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:O75351	Human	PMID:18385515
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q7LBR1	Human	PMID:18385515
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q9NZZ3	Human	PMID:18385515
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q9UN37	Human	PMID:18385515
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q9Y3E7	Human	PMID:18385515
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:P53990	Human	PMID:19129479
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:P53843	Human	PMID:19129480
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:P53990	Human	PMID:19129480
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:O43633	Human	PMID:21543490
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q9NZZ3	Human	PMID:21543490
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q9Y3E7	Human	PMID:21543490
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:O43633	Human	PMID:23105106
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:O75351	Human	PMID:23105106
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q7LBR1	Human	PMID:23105106
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q9NZZ3	Human	PMID:23105106
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q9UN37	Human	PMID:23105106
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q9Y3E7	Human	PMID:23105106
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q15561	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q9NZZ3	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:P24863	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q05516	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q15561	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q7LBR1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VTA1	IPI	UniProtKB:Q9HD42	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Vta1	IPI	PR:P46467	Mouse	PMID:15173323
Cellular Component	GO:0005737	cytoplasm	Vta1	IDA		Mouse	PMID:15173323
Cellular Component	GO:0005829	cytosol	VTA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	VTA1	IDA		Human	PMID:15644320
Cellular Component	GO:0070062	extracellular exosome	VTA1	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	VTA1	HDA		Human	PMID:19199708
Cellular Component	GO:0070062	extracellular exosome	VTA1	HDA		Human	PMID:23533145
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	VTA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	VTA1	IDA		Human	GO_REF:0000052
Biological Process	GO:0071985	multivesicular body sorting pathway	VTA1	IMP		Human	PMID:15644320

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern