Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes VPS35L
  • Mouse genes Vps35l
  • Rat genes Vps35l
  • Zfish genes vps35l
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Vps35l

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	VPS35L	IPI	UniProtKB:A8K0Z3	Human	PMID:25355947
Molecular Function	GO:0005515	protein binding	VPS35L	IPI	UniProtKB:O60826	Human	PMID:25355947
Molecular Function	GO:0005515	protein binding	VPS35L	IPI	UniProtKB:Q9Y4E1	Human	PMID:25355947
Molecular Function	GO:0005515	protein binding	VPS35L	IPI	UniProtKB:O14972,UniProtKB:Q9UBQ0	Human	PMID:28892079
Molecular Function	GO:0005515	protein binding	VPS35L	IPI	UniProtKB:O60826	Human	PMID:28892079
Molecular Function	GO:0005515	protein binding	VPS35L	IPI	UniProtKB:Q15036	Human	PMID:28892079
Molecular Function	GO:0005515	protein binding	VPS35L	IPI	UniProtKB:Q8N9S9	Human	PMID:28892079
Cellular Component	GO:0005768	endosome	VPS35L	IDA		Human	PMID:28892079
Biological Process	GO:0032456	endocytic recycling	VPS35L	IMP		Human	PMID:28892079
Biological Process	GO:0006893	Golgi to plasma membrane transport	VPS35L	IMP		Human	PMID:25355947

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern