Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UVSSA
  • Mouse genes Uvssa
  • Rat genes Uvssa
  • Zfish genes uvssa
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Uvssa

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	UVSSA	IPI	UniProtKB:Q93009	Human	PMID:22466611
Molecular Function	GO:0005515	protein binding	UVSSA	IPI	UniProtKB:Q03468	Human	PMID:22466612
Molecular Function	GO:0005515	protein binding	UVSSA	IPI	UniProtKB:Q13216	Human	PMID:22466612
Molecular Function	GO:0005515	protein binding	UVSSA	IPI	UniProtKB:Q93009	Human	PMID:22466612
Molecular Function	GO:0005515	protein binding	UVSSA	IPI	UniProtKB:O00505	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UVSSA	IPI	UniProtKB:P43358	Human	PMID:32296183
Molecular Function	GO:0000993	RNA polymerase II complex binding	UVSSA	IMP		Human	PMID:22466610
Molecular Function	GO:0000993	RNA polymerase II complex binding	UVSSA	IDA		Human	PMID:22466611
Molecular Function	GO:0000993	RNA polymerase II complex binding	UVSSA	IDA		Human	PMID:22466612
Cellular Component	GO:0005694	chromosome	UVSSA	IDA		Human	PMID:22466611
Cellular Component	GO:0005694	chromosome	UVSSA	IDA		Human	PMID:22466612
Cellular Component	GO:0005654	nucleoplasm	UVSSA	IDA		Human	GO_REF:0000052
Biological Process	GO:0016567	protein ubiquitination	UVSSA	IMP		Human	PMID:22466610
Biological Process	GO:0009411	response to UV	UVSSA	IMP		Human	PMID:22466610
Biological Process	GO:0009411	response to UV	UVSSA	IMP		Human	PMID:22466611
Biological Process	GO:0009411	response to UV	UVSSA	IMP		Human	PMID:22466612
Biological Process	GO:0006283	transcription-coupled nucleotide-excision repair	UVSSA	IMP		Human	PMID:22466610
Biological Process	GO:0006283	transcription-coupled nucleotide-excision repair	UVSSA	IMP		Human	PMID:22466611
Biological Process	GO:0006283	transcription-coupled nucleotide-excision repair	UVSSA	IMP		Human	PMID:22466612

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern