Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UFM1
  • Mouse genes Ufm1
  • Rat genes Ufm1
  • Zfish genes ufm1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ufm1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	UFM1	IPI	UniProtKB:Q9GZZ9	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	UFM1	IPI	UniProtKB:Q8VE47	Human	PMID:21304510
Molecular Function	GO:0005515	protein binding	UFM1	IPI	UniProtKB:Q9GZZ9	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	UFM1	IPI	UniProtKB:Q9GZZ9	Human	PMID:26872069
Molecular Function	GO:0005515	protein binding	UFM1	IPI	UniProtKB:Q9GZZ9	Human	PMID:27653677
Molecular Function	GO:0005515	protein binding	UFM1	IPI	UniProtKB:Q9GZZ9	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	UFM1	IPI	UniProtKB:Q9GZZ9	Human	PMID:29295865
Molecular Function	GO:0005515	protein binding	UFM1	IPI	UniProtKB:Q9Y3C8	Human	PMID:29868776
Molecular Function	GO:0005515	protein binding	UFM1	IPI	UniProtKB:Q9GZZ9	Human	PMID:30412706
Molecular Function	GO:0005515	protein binding	UFM1	IPI	UniProtKB:Q0VD86	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UFM1	IPI	UniProtKB:Q4G0X4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Ufm1	IPI	UniProtKB:Q80WW9|UniProtKB:Q99LM2	Mouse	MGI:MGI:5613470|PMID:21494687
Cellular Component	GO:0005737	cytoplasm	UFM1	IDA		Human	PMID:15071506
Cellular Component	GO:0005737	cytoplasm	UFM1	IDA		Human	PMID:28393202
Cellular Component	GO:0005737	cytoplasm	Ufm1	IDA		Mouse	MGI:MGI:5613470|PMID:21494687
Cellular Component	GO:0005783	endoplasmic reticulum	Ufm1	IDA		Mouse	MGI:MGI:5613470|PMID:21494687
Cellular Component	GO:0005634	nucleus	UFM1	IDA		Human	PMID:15071506
Cellular Component	GO:0005634	nucleus	UFM1	IDA		Human	PMID:28393202
Cellular Component	GO:0005634	nucleus	Ufm1	IDA		Mouse	MGI:MGI:5613470|PMID:21494687
Biological Process	GO:0007420	brain development	UFM1	IMP		Human	PMID:29868776
Biological Process	GO:0043066	negative regulation of apoptotic process	Ufm1	IMP		Rat	PMID:21494687|RGD:11567254
Biological Process	GO:0042308	negative regulation of protein import into nucleus	UFM1	IMP		Human	PMID:28393202
Biological Process	GO:1990592	protein K69-linked ufmylation	UFM1	IDA		Human	PMID:25219498
Biological Process	GO:0071569	protein ufmylation	UFM1	IDA		Human	PMID:15071506
Biological Process	GO:0071569	protein ufmylation	UFM1	IDA		Human	PMID:27653677
Biological Process	GO:0071569	protein ufmylation	UFM1	IMP		Human	PMID:29868776
Biological Process	GO:0071569	protein ufmylation	UFM1	IDA		Human	PMID:30412706
Biological Process	GO:0071569	protein ufmylation	UFM1	IMP		Human	PMID:32160526
Biological Process	GO:0071569	protein ufmylation	Ufm1	IDA		Mouse	MGI:MGI:5613470|PMID:21494687
Biological Process	GO:0071569	protein ufmylation	Ufm1	IDA		Mouse	MGI:MGI:4441024|PMID:20018847
Biological Process	GO:0033146	regulation of intracellular estrogen receptor signaling pathway	UFM1	IDA		Human	PMID:25219498
Biological Process	GO:0034976	response to endoplasmic reticulum stress	UFM1	IDA		Human	PMID:23152784
Biological Process	GO:0034976	response to endoplasmic reticulum stress	UFM1	IMP		Human	PMID:32160526
Biological Process	GO:0034976	response to endoplasmic reticulum stress	Ufm1	IMP		Mouse	MGI:MGI:5613470|PMID:21494687
Biological Process	GO:0061709	reticulophagy	UFM1	IMP		Human	PMID:32160526

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern