Comparative GO Graph (mouse, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes
  • Mouse genes Uba1y
  • Rat genes Uba1y
  • Zfish genes uba1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Uba1y

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004839	ubiquitin activating enzyme activity	Uba1y	IMP		Mouse	PMID:6327059
Biological Process	GO:0007409	axonogenesis	uba1	IMP	ZFIN:ZDB-MRPHLNO-140605-4	Zfish	PMID:24590288
Biological Process	GO:0016567	protein ubiquitination	Uba1y	IMP		Mouse	MGI:MGI:3028425|PMID:6327059
Biological Process	GO:0050727	regulation of inflammatory response	uba1	IMP	ZFIN:ZDB-GENO-211130-3	Zfish	PMID:33108101
Biological Process	GO:0050727	regulation of inflammatory response	uba1	IMP	ZFIN:ZDB-GENO-211130-2	Zfish	PMID:33108101
Biological Process	GO:0007283	spermatogenesis	Uba1y	IEP		Rat	PMID:18560730|RGD:2303980

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern