Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TXNL4A
  • Mouse genes Txnl4a
  • Rat genes RGD1560212
  • Zfish genes txnl4a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Txnl4a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TXNL4A	IPI	UniProtKB:O95400	Human	PMID:15840814
Molecular Function	GO:0005515	protein binding	TXNL4A	IPI	UniProtKB:O94906	Human	PMID:16723661
Molecular Function	GO:0005515	protein binding	TXNL4A	IPI	UniProtKB:Q15303	Human	PMID:20858735
Molecular Function	GO:0005515	protein binding	TXNL4A	IPI	UniProtKB:O00471	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TXNL4A	IPI	UniProtKB:Q9BRK4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TXNL4A	IPI	UniProtKB:O94906	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	TXNL4A	IPI	UniProtKB:O95400	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	TXNL4A	IPI	UniProtKB:Q96D03	Human	PMID:32296183
Cellular Component	GO:0005829	cytosol	TXNL4A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0031965	nuclear membrane	TXNL4A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	TXNL4A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	TXNL4A	IDA		Human	PMID:26912367
Cellular Component	GO:0071005	U2-type precatalytic spliceosome	TXNL4A	IDA		Human	PMID:28781166
Cellular Component	GO:0046540	U4/U6 x U5 tri-snRNP complex	TXNL4A	IPI		Human	PMID:30975767
Cellular Component	GO:0046540	U4/U6 x U5 tri-snRNP complex	TXNL4A	IDA		Human	PMID:26912367
Biological Process	GO:0000398	mRNA splicing, via spliceosome	TXNL4A	IDA		Human	PMID:28781166

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern