Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TUT1
  • Mouse genes Tut1
  • Rat genes Tut1
  • Zfish genes tut1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tut1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019899	enzyme binding	TUT1	IPI	UniProtKB:P48729	Human	PMID:18305108
Molecular Function	GO:0003730	mRNA 3'-UTR binding	TUT1	IDA		Human	PMID:21102410
Molecular Function	GO:1990817	poly(A) RNA polymerase activity	TUT1	IDA		Human	PMID:18288197
Molecular Function	GO:1990817	poly(A) RNA polymerase activity	TUT1	IDA		Human	PMID:28589955
Molecular Function	GO:0005515	protein binding	TUT1	IPI	UniProtKB:Q99755	Human	PMID:18288197
Molecular Function	GO:0005515	protein binding	TUT1	IPI	UniProtKB:Q99755-1	Human	PMID:18288197
Molecular Function	GO:0005515	protein binding	TUT1	IPI	UniProtKB:Q9UKF6	Human	PMID:18288197
Molecular Function	GO:0005515	protein binding	TUT1	IPI	UniProtKB:Q10570	Human	PMID:21102410
Molecular Function	GO:0005515	protein binding	TUT1	IPI	UniProtKB:Q9UKF6	Human	PMID:21102410
Molecular Function	GO:0005515	protein binding	TUT1	IPI	UniProtKB:Q9H079	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	TUT1	IDA		Human	PMID:18288197
Molecular Function	GO:0050265	RNA uridylyltransferase activity	TUT1	IDA		Human	PMID:16790842
Molecular Function	GO:0050265	RNA uridylyltransferase activity	TUT1	IDA		Human	PMID:18288197
Molecular Function	GO:0050265	RNA uridylyltransferase activity	TUT1	IDA		Human	PMID:28589955
Molecular Function	GO:0017070	U6 snRNA binding	TUT1	IDA		Human	PMID:28589955
Cellular Component	GO:0005829	cytosol	TUT1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016607	nuclear speck	TUT1	IDA		Human	PMID:18288197
Cellular Component	GO:0016607	nuclear speck	TUT1	IDA		Human	PMID:18305108
Cellular Component	GO:0005730	nucleolus	TUT1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	TUT1	IDA		Human	PMID:16790842
Cellular Component	GO:0005654	nucleoplasm	TUT1	IDA		Human	PMID:32839293
Cellular Component	GO:0005654	nucleoplasm	TUT1	IDA		Human	GO_REF:0000052
Biological Process	GO:0006378	mRNA polyadenylation	TUT1	IMP		Human	PMID:18288197
Biological Process	GO:0006378	mRNA polyadenylation	TUT1	IDA		Human	PMID:21102410
Biological Process	GO:0098789	pre-mRNA cleavage required for polyadenylation	TUT1	IDA		Human	PMID:21102410
Biological Process	GO:0016180	snRNA processing	TUT1	IMP		Human	PMID:16790842
Biological Process	GO:0034477	U6 snRNA 3'-end processing	TUT1	IDA		Human	PMID:28589955

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern