Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TSSC4
  • Mouse genes Tssc4
  • Rat genes Tssc4
  • Zfish genes tssc4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tssc4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TSSC4	IPI	UniProtKB:Q9NYB0	Human	PMID:21044950
Molecular Function	GO:0005515	protein binding	TSSC4	IPI	UniProtKB:O00505	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	TSSC4	IPI	UniProtKB:O00505	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TSSC4	IPI	UniProtKB:Q04864	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TSSC4	IPI	UniProtKB:Q08379	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TSSC4	IPI	UniProtKB:Q12933	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TSSC4	IPI	UniProtKB:Q13077	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TSSC4	IPI	UniProtKB:Q53SE7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TSSC4	IPI	UniProtKB:Q8TAP6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TSSC4	IPI	UniProtKB:Q96EP0-3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TSSC4	IPI	UniProtKB:O95905	Human	PMID:34131137
Molecular Function	GO:0005515	protein binding	TSSC4	IPI	UniProtKB:Q9UHR6	Human	PMID:34131137
Molecular Function	GO:0005515	protein binding	TSSC4	IPI	UniProtKB:Q9Y312	Human	PMID:34131137
Molecular Function	GO:0044877	protein-containing complex binding	TSSC4	IDA		Human	PMID:34131137
Molecular Function	GO:0070990	snRNP binding	TSSC4	IDA		Human	PMID:34131137
Cellular Component	GO:0005737	cytoplasm	TSSC4	IDA		Human	PMID:34131137
Cellular Component	GO:0005634	nucleus	TSSC4	IDA		Human	PMID:34131137
Biological Process	GO:0000244	spliceosomal tri-snRNP complex assembly	TSSC4	IMP		Human	PMID:34131137

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern