Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TSEN54
  • Mouse genes Tsen54
  • Rat genes Tsen54
  • Zfish genes tsen54
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tsen54

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:Q8NCE0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:A6NEM1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:O15131	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:P25791-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:P36406	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:P41227	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:Q15306	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:Q15323	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:Q2TAC2-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:Q6NUQ1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:Q8N7C3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:Q8NCE0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:Q8NI38	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:Q92989	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:Q969G2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:Q96DV4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:Q9H0C1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:Q9NZQ3-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSEN54	IPI	UniProtKB:Q9UBR4-2	Human	PMID:32296183
Biological Process	GO:0048854	brain morphogenesis	tsen54	IMP	ZFIN:ZDB-MRPHLNO-110419-1	Zfish	PMID:21273289
Biological Process	GO:0048854	brain morphogenesis	tsen54	IMP	ZFIN:ZDB-MRPHLNO-110419-2	Zfish	PMID:21273289
Biological Process	GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	TSEN54	IDA		Human	PMID:17495927

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern