Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TNRC6C
  • Mouse genes Tnrc6c
  • Rat genes Tnrc6c
  • Zfish genes tnrc6c1,tnrc6c2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tnrc6c

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q9UKV8	Human	PMID:19383768
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:P11940	Human	PMID:19716330
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q8CJG0	Human	PMID:19838187
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q9UKV8	Human	PMID:19838187
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:P11940	Human	PMID:20098421
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:P11940	Human	PMID:20181956
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:P11940	Human	PMID:21063388
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:P21187	Human	PMID:21063388
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:A5YKK6	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:O75175	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:P11940	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q504Q3	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q58A45	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q96LI5	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q9H9A5	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q9NZN8	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q9UIV1	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q9UKV8	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q9ULM6	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:A5YKK6	Human	PMID:21984185
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:O75175	Human	PMID:21984185
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q504Q3	Human	PMID:21984185
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q96LI5	Human	PMID:21984185
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q9H9A5	Human	PMID:21984185
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q9NZN8	Human	PMID:21984185
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q9UIV1	Human	PMID:21984185
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:P11940	Human	PMID:23340509
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q8CJG0	Human	PMID:23340509
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:A5YKK6	Human	PMID:23463101
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:P21187	Human	PMID:23463101
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:A5YKK6	Human	PMID:24768540
Molecular Function	GO:0005515	protein binding	TNRC6C	IPI	UniProtKB:Q92600	Human	PMID:24768540
Biological Process	GO:0035162	embryonic hemopoiesis	Tnrc6c	IMP	MGI:MGI:4124681	Mouse	PMID:22187428
Biological Process	GO:0048568	embryonic organ development	Tnrc6c	IMP	MGI:MGI:4124681	Mouse	PMID:22187428
Biological Process	GO:0007492	endoderm development	Tnrc6c	IMP	MGI:MGI:4124681	Mouse	PMID:22187428
Biological Process	GO:0001706	endoderm formation	Tnrc6c	IMP	MGI:MGI:4124681	Mouse	PMID:22187428
Biological Process	GO:0060430	lung saccule development	Tnrc6c	IMP	MGI:MGI:4001992	Mouse	PMID:28811219
Biological Process	GO:0035195	miRNA-mediated gene silencing	TNRC6C	IGI	UniProtKB:Q8SY33	Human	PMID:23172285
Biological Process	GO:1900153	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	TNRC6C	IDA		Human	PMID:21984185
Biological Process	GO:0060213	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	TNRC6C	IDA		Human	PMID:21984185
Biological Process	GO:0060964	regulation of miRNA-mediated gene silencing	Tnrc6c	IMP	MGI:MGI:4124681	Mouse	PMID:22187428
Biological Process	GO:0007179	transforming growth factor beta receptor signaling pathway	Tnrc6c	IMP	MGI:MGI:4001992	Mouse	PMID:28811219

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern