Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TNRC6B
  • Mouse genes Tnrc6b
  • Rat genes Tnrc6b
  • Zfish genes tnrc6ba,tnrc6bb.1,tnrc6bb.2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tnrc6b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TNRC6B	IPI	UniProtKB:Q9UKV8	Human	PMID:17932509
Molecular Function	GO:0005515	protein binding	TNRC6B	IPI	UniProtKB:Q9UKV8	Human	PMID:19383768
Molecular Function	GO:0005515	protein binding	TNRC6B	IPI	UniProtKB:Q9UKV8	Human	PMID:19716330
Molecular Function	GO:0005515	protein binding	TNRC6B	IPI	UniProtKB:Q9UKV8	Human	PMID:19838187
Molecular Function	GO:0005515	protein binding	TNRC6B	IPI	UniProtKB:P11940	Human	PMID:21063388
Molecular Function	GO:0005515	protein binding	TNRC6B	IPI	UniProtKB:P21187	Human	PMID:21063388
Molecular Function	GO:0005515	protein binding	TNRC6B	IPI	UniProtKB:A5YKK6	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6B	IPI	UniProtKB:P11940	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6B	IPI	UniProtKB:Q58A45	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6B	IPI	UniProtKB:Q9UKV8	Human	PMID:24043833
Molecular Function	GO:0005515	protein binding	TNRC6B	IPI	UniProtKB:Q9HCE1	Human	PMID:24726324
Molecular Function	GO:0003723	RNA binding	TNRC6B	HDA		Human	PMID:22658674
Biological Process	GO:0035278	miRNA-mediated gene silencing by inhibition of translation	TNRC6B	IDA		Human	PMID:32354837
Biological Process	GO:1900153	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	TNRC6B	IMP		Human	PMID:19716330
Biological Process	GO:0060213	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	TNRC6B	IMP		Human	PMID:19716330
Biological Process	GO:0031047	RNA-mediated gene silencing	TNRC6B	IMP		Human	PMID:19716330

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern