Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TNFSF9
  • Mouse genes Tnfsf9
  • Rat genes Tnfsf9
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tnfsf9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005102	signaling receptor binding	Tnfsf9	IPI	PR:P20334	Mouse	PMID:8405064
Molecular Function	GO:0032813	tumor necrosis factor receptor superfamily binding	Tnfsf9	IPI	PR:P20334	Mouse	PMID:18640726
Cellular Component	GO:0005886	plasma membrane	Tnfsf9	IDA		Mouse	PMID:8405064
Cellular Component	GO:0005886	plasma membrane	Tnfsf9	IDA		Mouse	PMID:25549946
Biological Process	GO:0043011	myeloid dendritic cell differentiation	Tnfsf9	IDA		Rat	PMID:18687212|RGD:2317345
Biological Process	GO:0042104	positive regulation of activated T cell proliferation	Tnfsf9	IDA		Rat	PMID:19187795|RGD:2317344
Biological Process	GO:0045585	positive regulation of cytotoxic T cell differentiation	Tnfsf9	IDA		Rat	PMID:19187795|RGD:2317344
Biological Process	GO:0032735	positive regulation of interleukin-12 production	Tnfsf9	IDA		Rat	PMID:18687212|RGD:2317345
Biological Process	GO:0032755	positive regulation of interleukin-6 production	Tnfsf9	IDA		Rat	PMID:18687212|RGD:2317345
Biological Process	GO:0032729	positive regulation of type II interferon production	Tnfsf9	IDA		Rat	PMID:19187795|RGD:2317344
Biological Process	GO:0033084	regulation of immature T cell proliferation in thymus	Tnfsf9	IDA		Mouse	PMID:8405064

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern