Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TMIGD1
  • Mouse genes Tmigd1
  • Rat genes Tmigd1
  • Zfish genes tmigd1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tmigd1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0098631	cell adhesion mediator activity	Tmigd1	IDA		Mouse	PMID:33129760
Molecular Function	GO:0098632	cell-cell adhesion mediator activity	Tmigd1	IDA		Mouse	PMID:26342724
Molecular Function	GO:0042803	protein homodimerization activity	Tmigd1	IPI	PR:Q9D7L8	Mouse	PMID:26342724
Cellular Component	GO:0009986	cell surface	Tmigd1	IDA		Mouse	PMID:26342724
Cellular Component	GO:0005737	cytoplasm	TMIGD1	IDA		Human	PMID:26342724
Cellular Component	GO:0005829	cytosol	TMIGD1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	TMIGD1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	TMIGD1	IDA		Human	PMID:26342724
Biological Process	GO:1904970	brush border assembly	Tmigd1	IMP	MGI:MGI:6506201	Mouse	PMID:33129760
Biological Process	GO:0098743	cell aggregation	Tmigd1	IDA		Mouse	PMID:26342724
Biological Process	GO:0016477	cell migration	Tmigd1	IDA		Mouse	PMID:26342724
Biological Process	GO:0098609	cell-cell adhesion	Tmigd1	IDA		Mouse	PMID:26342724
Biological Process	GO:0045216	cell-cell junction organization	Tmigd1	IMP	MGI:MGI:6506201	Mouse	PMID:33129760
Biological Process	GO:0071447	cellular response to hydroperoxide	Tmigd1	IDA		Mouse	PMID:26342724
Biological Process	GO:0060574	intestinal epithelial cell maturation	Tmigd1	IMP	MGI:MGI:6506201	Mouse	PMID:33129760
Biological Process	GO:0043066	negative regulation of apoptotic process	TMIGD1	IMP		Human	PMID:26342724
Biological Process	GO:0050680	negative regulation of epithelial cell proliferation	Tmigd1	IMP	MGI:MGI:6506201	Mouse	PMID:33129760
Biological Process	GO:0008104	protein localization	Tmigd1	IMP	MGI:MGI:6506201	Mouse	PMID:33129760
Biological Process	GO:0030334	regulation of cell migration	TMIGD1	IDA		Human	PMID:26342724
Biological Process	GO:0042127	regulation of cell population proliferation	TMIGD1	IDA		Human	PMID:26342724
Biological Process	GO:0090559	regulation of membrane permeability	TMIGD1	IMP		Human	PMID:26342724
Biological Process	GO:0007584	response to nutrient	Tmigd1	IDA		Mouse	PMID:26342724

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern