Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TMEM199
  • Mouse genes Tmem199
  • Rat genes Tmem199
  • Zfish genes tmem199
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tmem199

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TMEM199	IPI	UniProtKB:O75477	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TMEM199	IPI	UniProtKB:Q8N6L0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TMEM199	IPI	UniProtKB:P38484	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM199	IPI	UniProtKB:Q12846	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM199	IPI	UniProtKB:Q13323	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM199	IPI	UniProtKB:Q13520	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM199	IPI	UniProtKB:Q15125	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM199	IPI	UniProtKB:Q16623	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM199	IPI	UniProtKB:Q8N5M9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM199	IPI	UniProtKB:Q96EP9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM199	IPI	UniProtKB:Q9GZR5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM199	IPI	UniProtKB:Q9H6H4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM199	IPI	UniProtKB:Q9NPL8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM199	IPI	UniProtKB:Q9NUH8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM199	IPI	UniProtKB:Q9UGN4	Human	PMID:32296183
Cellular Component	GO:0030663	COPI-coated vesicle membrane	TMEM199	IDA		Human	PMID:26833330
Cellular Component	GO:0005783	endoplasmic reticulum	TMEM199	IDA		Human	PMID:28296633
Cellular Component	GO:0033116	endoplasmic reticulum-Golgi intermediate compartment membrane	TMEM199	IDA		Human	PMID:26833330
Cellular Component	GO:0016471	vacuolar proton-transporting V-type ATPase complex	TMEM199	IDA		Human	PMID:28296633
Biological Process	GO:0036295	cellular response to increased oxygen levels	TMEM199	IMP		Human	PMID:28296633
Biological Process	GO:0006879	intracellular iron ion homeostasis	TMEM199	IMP		Human	PMID:28296633
Biological Process	GO:0007042	lysosomal lumen acidification	TMEM199	IMP		Human	PMID:28296633
Biological Process	GO:1905146	lysosomal protein catabolic process	TMEM199	IMP		Human	PMID:28296633

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern