Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TMEM163
  • Mouse genes Tmem163
  • Rat genes Tmem163
  • Zfish genes tmem163a,tmem163b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tmem163

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Tmem163	IPI	UniProtKB:Q99J21	Mouse	PMID:25130899
Molecular Function	GO:0008270	zinc ion binding	Tmem163	IDA		Rat	PMID:21668449|RGD:8553679
Cellular Component	GO:0031901	early endosome membrane	Tmem163	IDA		Rat	PMID:21668449|RGD:8553679
Cellular Component	GO:0097708	intracellular vesicle	Tmem163	EXP		Mouse	PMID:25130899
Cellular Component	GO:0005886	plasma membrane	Tmem163	EXP		Mouse	PMID:25130899
Cellular Component	GO:0030672	synaptic vesicle membrane	Tmem163	IDA		Mouse	MGI:MGI:3765392|PMID:17623043
Cellular Component	GO:0030672	synaptic vesicle membrane	Tmem163	IDA		Rat	PMID:17623043|RGD:8553964
Biological Process	GO:0099180	zinc ion import into synaptic vesicle	Tmem163	IDA		Rat	PMID:27917477|RGD:13702361
Biological Process	GO:0099180	zinc ion import into synaptic vesicle	Tmem163	IMP		Rat	PMID:27917477|RGD:13702361

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern