Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TMED9
  • Mouse genes Tmed9
  • Rat genes Tmed9
  • Zfish genes tmed9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tmed9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TMED9	IPI	UniProtKB:P17706-1	Human	PMID:16595549
Molecular Function	GO:0005515	protein binding	TMED9	IPI	UniProtKB:O43315	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMED9	IPI	UniProtKB:O43736	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMED9	IPI	UniProtKB:Q96GM1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMED9	IPI	UniProtKB:Q96IW7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMED9	IPI	UniProtKB:Q9H2L4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Tmed9	IPI	UniProtKB:Q9R064	Rat	PMID:11739402|RGD:2317249
Molecular Function	GO:0019905	syntaxin binding	TMED9	IPI	UniProtKB:Q9Z158	Human	PMID:21545355
Cellular Component	GO:0005783	endoplasmic reticulum	TMED9	IDA		Human	PMID:12237308
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	TMED9	IDA		Human	PMID:12237308
Cellular Component	GO:0070062	extracellular exosome	TMED9	HDA		Human	PMID:20458337
Cellular Component	GO:0005794	Golgi apparatus	TMED9	IDA		Human	PMID:12237308
Cellular Component	GO:0008021	synaptic vesicle	Tmed9	IDA		Mouse	PMID:25438880
Biological Process	GO:0048205	COPI coating of Golgi vesicle	TMED9	IMP		Human	PMID:18287528
Biological Process	GO:0007030	Golgi organization	TMED9	IMP		Human	PMID:18287528
Biological Process	GO:0010638	positive regulation of organelle organization	TMED9	IMP		Human	PMID:18287528

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern