Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TM4SF5
  • Mouse genes Tm4sf5
  • Rat genes Tm4sf5
  • Zfish genes tm4sf5
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tm4sf5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0034618	arginine binding	TM4SF5	IMP		Human	PMID:30956113
Molecular Function	GO:0005515	protein binding	TM4SF5	IPI	UniProtKB:P30825	Human	PMID:30956113
Molecular Function	GO:0005515	protein binding	TM4SF5	IPI	UniProtKB:P42345	Human	PMID:30956113
Molecular Function	GO:0005515	protein binding	TM4SF5	IPI	UniProtKB:Q8NBW4	Human	PMID:30956113
Molecular Function	GO:0005515	protein binding	TM4SF5	IPI	UniProtKB:Q8WTX7	Human	PMID:30956113
Molecular Function	GO:0005515	protein binding	TM4SF5	IPI	UniProtKB:Q86WK6	Human	PMID:32296183
Cellular Component	GO:0005765	lysosomal membrane	TM4SF5	IDA		Human	PMID:30956113
Cellular Component	GO:0005886	plasma membrane	TM4SF5	IDA		Human	PMID:30956113
Biological Process	GO:2000045	regulation of G1/S transition of mitotic cell cycle	TM4SF5	IDA		Human	PMID:20399237
Biological Process	GO:0048741	skeletal muscle fiber development	tm4sf5	IMP	ZFIN:ZDB-MRPHLNO-171108-1	Zfish	PMID:24897542
Biological Process	GO:0048741	skeletal muscle fiber development	tm4sf5	IMP	ZFIN:ZDB-MRPHLNO-171114-1	Zfish	PMID:24897542

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern