Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SYBU
  • Mouse genes Sybu
  • Rat genes Sybu
  • Zfish genes sybu
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sybu

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008017	microtubule binding	Sybu	IDA		Rat	PMID:22975310|RGD:8554225
Molecular Function	GO:0005515	protein binding	SYBU	IPI	UniProtKB:Q16623	Human	PMID:15459722
Molecular Function	GO:0005515	protein binding	SYBU	IPI	UniProtKB:P54253	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	sybu	IPI	UniProtKB:B0UYK4	Zfish	PMID:20150281
Cellular Component	GO:0097433	dense body	Sybu	IDA		Rat	PMID:22975310|RGD:8554225
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	SYBU	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005874	microtubule	SYBU	IDA		Human	PMID:15459722
Cellular Component	GO:0005874	microtubule	Sybu	IDA		Rat	PMID:22975310|RGD:8554225
Cellular Component	GO:0031982	vesicle	SYBU	IDA		Human	PMID:15459722
Cellular Component	GO:0031982	vesicle	Sybu	IDA		Rat	PMID:22975310|RGD:8554225
Biological Process	GO:1990048	anterograde neuronal dense core vesicle transport	Sybu	IMP		Rat	PMID:17611281|RGD:13217407
Biological Process	GO:0019896	axonal transport of mitochondrion	Sybu	IMP		Rat	PMID:19828815|RGD:13217418
Biological Process	GO:0048263	determination of dorsal identity	sybu	IMP	ZFIN:ZDB-GENO-100409-3	Zfish	PMID:20150281
Biological Process	GO:0035774	positive regulation of insulin secretion involved in cellular response to glucose stimulus	Sybu	IMP		Rat	PMID:22975310|RGD:8554225
Biological Process	GO:0060828	regulation of canonical Wnt signaling pathway	sybu	IMP	ZFIN:ZDB-GENO-040510-2	Zfish	PMID:15110047
Biological Process	GO:0061178	regulation of insulin secretion involved in cellular response to glucose stimulus	Sybu	IDA		Rat	PMID:22975310|RGD:8554225
Biological Process	GO:0060025	regulation of synaptic activity	Sybu	IMP		Rat	PMID:19828815|RGD:13217418
Biological Process	GO:2000053	regulation of Wnt signaling pathway involved in dorsal/ventral axis specification	sybu	IMP	ZFIN:ZDB-GENO-040510-2	Zfish	PMID:15110047
Biological Process	GO:0060074	synapse maturation	Sybu	IMP		Rat	PMID:19828815|RGD:13217418

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern