Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SURF4
  • Mouse genes Surf4
  • Rat genes Surf4
  • Zfish genes surf4,surf4l
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Surf4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0038024	cargo receptor activity	SURF4	IMP		Human	PMID:29643117
Molecular Function	GO:0038024	cargo receptor activity	SURF4	IDA		Human	PMID:30251625
Molecular Function	GO:0038024	cargo receptor activity	SURF4	IDA		Human	PMID:32989016
Molecular Function	GO:0038024	cargo receptor activity	SURF4	IDA		Human	PMID:34015269
Molecular Function	GO:0005515	protein binding	SURF4	IPI	UniProtKB:P49257	Human	PMID:18287528
Molecular Function	GO:0005515	protein binding	SURF4	IPI	UniProtKB:Q86WV6	Human	PMID:21903422
Molecular Function	GO:0005515	protein binding	SURF4	IPI	UniProtKB:Q8VCW4	Human	PMID:21903422
Molecular Function	GO:0005515	protein binding	SURF4	IPI	UniProtKB:Q86WV6	Human	PMID:29251827
Molecular Function	GO:0005515	protein binding	Surf4	IPI	UniProtKB:P33175|UniProtKB:Q3TXX3	Mouse	MGI:MGI:5795817|PMID:21976701
Cellular Component	GO:0005829	cytosol	SURF4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	SURF4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	SURF4	IDA		Human	PMID:15308636
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	SURF4	IDA		Human	PMID:18287528
Cellular Component	GO:0005794	Golgi apparatus	SURF4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0031965	nuclear membrane	SURF4	IDA		Human	GO_REF:0000052
Biological Process	GO:0007030	Golgi organization	SURF4	IMP		Human	PMID:18287528
Biological Process	GO:0055088	lipid homeostasis	SURF4	IDA		Human	PMID:34015269
Biological Process	GO:0042953	lipoprotein transport	SURF4	IMP		Human	PMID:29643117
Biological Process	GO:0042953	lipoprotein transport	SURF4	IDA		Human	PMID:34015269
Biological Process	GO:0010638	positive regulation of organelle organization	SURF4	IMP		Human	PMID:18287528
Biological Process	GO:0032368	regulation of lipid transport	SURF4	IDA		Human	PMID:34015269

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern