Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STX18
  • Mouse genes Stx18
  • Rat genes Stx18
  • Zfish genes stx18
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Stx18

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	STX18	IPI	UniProtKB:Q9NZ43	Human	PMID:15029241
Molecular Function	GO:0005515	protein binding	STX18	IPI	UniProtKB:Q12981	Human	PMID:15272311
Molecular Function	GO:0005515	protein binding	STX18	IPI	UniProtKB:O75396	Human	PMID:19369418
Molecular Function	GO:0005515	protein binding	STX18	IPI	UniProtKB:Q9NZ43	Human	PMID:19369418
Molecular Function	GO:0005515	protein binding	STX18	IPI	UniProtKB:O75396	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	STX18	IPI	UniProtKB:Q9NZ43	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	Stx18	IPI	UniProtKB:Q62991	Rat	PMID:11879635|RGD:10047249
Molecular Function	GO:0019904	protein domain specific binding	Stx18	IPI	UniProtKB:P03109	Mouse	MGI:MGI:5572870|PMID:17475643
Cellular Component	GO:0005783	endoplasmic reticulum	STX18	IDA		Human	PMID:10788491
Biological Process	GO:0090158	endoplasmic reticulum membrane organization	STX18	IMP		Human	PMID:19401338
Biological Process	GO:1902953	positive regulation of ER to Golgi vesicle-mediated transport	STX18	IMP		Human	PMID:10788491
Biological Process	GO:1902953	positive regulation of ER to Golgi vesicle-mediated transport	STX18	IMP		Human	PMID:19401338
Biological Process	GO:1902117	positive regulation of organelle assembly	STX18	IMP		Human	PMID:19401338
Biological Process	GO:1903358	regulation of Golgi organization	STX18	IMP		Human	PMID:19401338

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern