Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STRA6LP
  • Mouse genes Stra6l
  • Rat genes Stra6l
  • Zfish genes stra6l
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Stra6l

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Stra6l	IPI	PR:Q00724	Mouse	PMID:23105095
Cellular Component	GO:0031090	organelle membrane	stra6l	IDA		Zfish	PMID:29176573
Cellular Component	GO:0005886	plasma membrane	Stra6l	IDA		Mouse	PMID:23105095
Cellular Component	GO:0005886	plasma membrane	stra6l	IDA		Zfish	PMID:29176573
Biological Process	GO:0043010	camera-type eye development	stra6l	IMP	ZFIN:ZDB-GENO-211019-3	Zfish	PMID:32365517
Biological Process	GO:0051649	establishment of localization in cell	Stra6l	IMP		Mouse	PMID:23105095
Biological Process	GO:0007634	optokinetic behavior	stra6l	IMP	ZFIN:ZDB-GENO-180523-3	Zfish	PMID:29176573
Biological Process	GO:0042461	photoreceptor cell development	stra6l	IMP	ZFIN:ZDB-GENO-211019-3	Zfish	PMID:32365517
Biological Process	GO:0042461	photoreceptor cell development	stra6l	IMP	ZFIN:ZDB-GENO-211019-4	Zfish	PMID:32365517
Biological Process	GO:0045494	photoreceptor cell maintenance	stra6l	IMP	ZFIN:ZDB-GENO-211019-3	Zfish	PMID:32365517
Biological Process	GO:0045494	photoreceptor cell maintenance	stra6l	IMP	ZFIN:ZDB-GENO-211019-4	Zfish	PMID:32365517
Biological Process	GO:0045494	photoreceptor cell maintenance	stra6l	IMP	ZFIN:ZDB-GENO-180531-3	Zfish	PMID:29176573
Biological Process	GO:0045494	photoreceptor cell maintenance	stra6l	IMP	ZFIN:ZDB-GENO-180523-3	Zfish	PMID:29176573
Biological Process	GO:0035845	photoreceptor cell outer segment organization	stra6l	IMP	ZFIN:ZDB-GENO-180523-3	Zfish	PMID:29176573
Biological Process	GO:0035845	photoreceptor cell outer segment organization	stra6l	IMP	ZFIN:ZDB-GENO-180531-3	Zfish	PMID:29176573
Biological Process	GO:0034633	retinol transport	Stra6l	IGI	MGI:MGI:97879	Mouse	PMID:23105095
Biological Process	GO:0034633	retinol transport	stra6l	IDA		Zfish	PMID:29176573
Biological Process	GO:0071939	vitamin A import into cell	Stra6l	IMP		Mouse	PMID:23105095

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern