Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SRSF9
  • Mouse genes Srsf9
  • Rat genes Srsf9
  • Zfish genes srsf9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Srsf9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SRSF9	IPI	UniProtKB:O60936	Human	PMID:10196175
Molecular Function	GO:0005515	protein binding	SRSF9	IPI	UniProtKB:P38159	Human	PMID:10749975
Molecular Function	GO:0005515	protein binding	SRSF9	IPI	UniProtKB:P62995	Human	PMID:10749975
Molecular Function	GO:0005515	protein binding	SRSF9	IPI	UniProtKB:Q5JVS0	Human	PMID:19523114
Molecular Function	GO:0005515	protein binding	SRSF9	IPI	UniProtKB:P38159	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SRSF9	IPI	UniProtKB:P62995	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SRSF9	IPI	UniProtKB:Q15287	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Srsf9	IPI	RGD:620921	Rat	PMID:11118435|RGD:632715
Molecular Function	GO:0005515	protein binding	Srsf9	IPI	RGD:620613	Rat	PMID:9671816|RGD:634000
Molecular Function	GO:0019904	protein domain specific binding	SRSF9	IPI	UniProtKB:P0DJD4	Human	PMID:10749975
Molecular Function	GO:0003723	RNA binding	SRSF9	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	SRSF9	HDA		Human	PMID:22681889
Cellular Component	GO:0005730	nucleolus	SRSF9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SRSF9	IDA		Human	GO_REF:0000052
Biological Process	GO:0048025	negative regulation of mRNA splicing, via spliceosome	SRSF9	IDA		Human	PMID:15009664
Biological Process	GO:0043279	response to alkaloid	Srsf9	IEP		Rat	PMID:23275536|RGD:10059614
Biological Process	GO:0009636	response to toxic substance	Srsf9	IEP		Rat	PMID:23275536|RGD:10059614

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern