Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SRP68
  • Mouse genes Srp68
  • Rat genes Srp68
  • Zfish genes srp68
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Srp68

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008312	7S RNA binding	SRP68	IMP		Human	PMID:27899666
Molecular Function	GO:0005515	protein binding	SRP68	IPI	UniProtKB:O76094	Human	PMID:16672232
Molecular Function	GO:0005515	protein binding	SRP68	IPI	UniProtKB:P09132	Human	PMID:24700861
Molecular Function	GO:0005515	protein binding	SRP68	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0019904	protein domain specific binding	SRP68	IPI	UniProtKB:O76094	Human	PMID:27899666
Molecular Function	GO:0043022	ribosome binding	SRP68	IMP		Human	PMID:27899666
Molecular Function	GO:0003723	RNA binding	SRP68	HDA		Human	PMID:22658674
Molecular Function	GO:0005047	signal recognition particle binding	SRP68	IPI	UniProtKB:O76094	Human	PMID:17254600
Cellular Component	GO:0005829	cytosol	SRP68	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005925	focal adhesion	SRP68	IDA		Human	GO_REF:0000052
Cellular Component	GO:0048500	signal recognition particle	SRP68	IDA		Human	PMID:27899666
Cellular Component	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	SRP68	IDA		Human	PMID:18089836
Biological Process	GO:0009410	response to xenobiotic stimulus	SRP68	IDA		Human	PMID:18089836

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern