Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNX13
  • Mouse genes Snx13
  • Rat genes Snx13
  • Zfish genes snx13
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snx13

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0035091	phosphatidylinositol binding	SNX13	IDA		Human	PMID:11729322
Molecular Function	GO:0032266	phosphatidylinositol-3-phosphate binding	SNX13	IDA		Human	PMID:25148684
Cellular Component	GO:0005769	early endosome	SNX13	IDA		Human	PMID:11729322
Biological Process	GO:0006886	intracellular protein transport	SNX13	IMP		Human	PMID:11729322
Biological Process	GO:0010667	negative regulation of cardiac muscle cell apoptotic process	snx13	IMP	ZFIN:ZDB-MRPHLNO-150817-1	Zfish	PMID:25295779
Biological Process	GO:0010667	negative regulation of cardiac muscle cell apoptotic process	snx13	IMP	ZFIN:ZDB-MRPHLNO-150814-5	Zfish	PMID:25295779
Biological Process	GO:2001237	negative regulation of extrinsic apoptotic signaling pathway	snx13	IMP	ZFIN:ZDB-MRPHLNO-150814-5	Zfish	PMID:25295779
Biological Process	GO:2001237	negative regulation of extrinsic apoptotic signaling pathway	snx13	IMP	ZFIN:ZDB-MRPHLNO-150817-1	Zfish	PMID:25295779
Biological Process	GO:0043547	positive regulation of GTPase activity	SNX13	IDA		Human	PMID:11729322

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern