Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNAPC4
  • Mouse genes Snapc4
  • Rat genes Snapc4
  • Zfish genes snapc4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snapc4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	SNAPC4	IDA		Human	PMID:11056176
Molecular Function	GO:0003677	DNA binding	SNAPC4	IDA		Human	PMID:9418884
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	SNAPC4	IDA		Human	PMID:9418884
Molecular Function	GO:0000995	RNA polymerase III general transcription initiation factor activity	SNAPC4	IDA		Human	PMID:9418884
Cellular Component	GO:0019185	snRNA-activating protein complex	SNAPC4	IDA		Human	PMID:11056176
Cellular Component	GO:0019185	snRNA-activating protein complex	SNAPC4	IDA		Human	PMID:9418884
Biological Process	GO:0035622	intrahepatic bile duct development	snapc4	IMP	ZFIN:ZDB-MRPHLNO-120320-11	Zfish	PMID:22222761
Biological Process	GO:0035622	intrahepatic bile duct development	snapc4	IMP	ZFIN:ZDB-GENO-120328-9	Zfish	PMID:22222761
Biological Process	GO:0035622	intrahepatic bile duct development	snapc4	IMP	ZFIN:ZDB-MRPHLNO-120320-10	Zfish	PMID:22222761
Biological Process	GO:0031016	pancreas development	snapc4	IMP	ZFIN:ZDB-MRPHLNO-120420-4	Zfish	PMID:22496837
Biological Process	GO:0031016	pancreas development	snapc4	IMP	ZFIN:ZDB-MRPHLNO-120420-3	Zfish	PMID:22496837
Biological Process	GO:0042795	snRNA transcription by RNA polymerase II	SNAPC4	IDA		Human	PMID:9418884
Biological Process	GO:0042796	snRNA transcription by RNA polymerase III	SNAPC4	IDA		Human	PMID:9418884

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern