Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SMG8
  • Mouse genes Smg8
  • Rat genes Smg8
  • Zfish genes smg8
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Smg8

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SMG8	IPI	UniProtKB:Q96Q15	Human	PMID:19417104
Molecular Function	GO:0005515	protein binding	SMG8	IPI	UniProtKB:Q9H0W8	Human	PMID:19417104
Molecular Function	GO:0005515	protein binding	SMG8	IPI	UniProtKB:Q9H0W8	Human	PMID:20817927
Molecular Function	GO:0005515	protein binding	SMG8	IPI	UniProtKB:Q9H0W8	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	SMG8	IPI	UniProtKB:Q14147,UniProtKB:Q96Q15,UniProtKB:Q9H0W8	Human	PMID:26841701
Molecular Function	GO:0005515	protein binding	SMG8	IPI	UniProtKB:Q92900,UniProtKB:Q96Q15,UniProtKB:Q9H0W8	Human	PMID:26841701
Molecular Function	GO:0005515	protein binding	SMG8	IPI	UniProtKB:Q96Q15	Human	PMID:33205750
Biological Process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	SMG8	IMP		Human	PMID:19417104
Biological Process	GO:0045859	regulation of protein kinase activity	SMG8	IMP		Human	PMID:19417104

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern