Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLIRP
  • Mouse genes Slirp
  • Rat genes Slirp
  • Zfish genes slirp
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slirp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SLIRP	IPI	UniProtKB:P42704	Human	PMID:22045337
Molecular Function	GO:0005515	protein binding	SLIRP	IPI	UniProtKB:Q5JR59	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLIRP	IPI	UniProtKB:Q68D86	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLIRP	IPI	UniProtKB:Q6A162	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLIRP	IPI	UniProtKB:Q8ND90	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLIRP	IPI	UniProtKB:P42704	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	SLIRP	IPI	UniProtKB:O14561	Human	PMID:28892042
Molecular Function	GO:0005515	protein binding	SLIRP	IPI	UniProtKB:Q15007	Human	PMID:29507755
Molecular Function	GO:0005515	protein binding	SLIRP	IPI	UniProtKB:A2BDD9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLIRP	IPI	UniProtKB:A6NEM1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLIRP	IPI	UniProtKB:O14561	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLIRP	IPI	UniProtKB:Q15007	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLIRP	IPI	UniProtKB:Q7Z3Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLIRP	IPI	UniProtKB:Q8N2I9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLIRP	IPI	UniProtKB:Q9NRD5	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	SLIRP	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	SLIRP	HDA		Human	PMID:22681889
Cellular Component	GO:0001669	acrosomal vesicle	Slirp	IDA		Mouse	PMID:23976951
Cellular Component	GO:0005737	cytoplasm	Slirp	IDA		Mouse	PMID:23976951
Cellular Component	GO:0005739	mitochondrion	SLIRP	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	SLIRP	HDA		Human	PMID:20833797
Cellular Component	GO:0005739	mitochondrion	Slirp	IDA		Mouse	PMID:23976951
Cellular Component	GO:0005739	mitochondrion	Slirp	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005739	mitochondrion	Slirp	IDA		Mouse	PMID:22045337
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Slirp	IDA		Mouse	PMID:23976951
Cellular Component	GO:1990904	ribonucleoprotein complex	Slirp	IDA		Mouse	PMID:22045337
Cellular Component	GO:0036126	sperm flagellum	Slirp	IDA		Mouse	PMID:23976951
Biological Process	GO:0030317	flagellated sperm motility	Slirp	IMP		Mouse	PMID:23976951
Biological Process	GO:0070584	mitochondrion morphogenesis	Slirp	IMP		Mouse	PMID:23976951
Biological Process	GO:0000961	negative regulation of mitochondrial RNA catabolic process	Slirp	IGI	MGI:MGI:1919666	Mouse	PMID:22045337
Biological Process	GO:0007338	single fertilization	Slirp	IMP		Mouse	PMID:23976951
Biological Process	GO:0007286	spermatid development	Slirp	IMP		Mouse	PMID:23976951

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern