Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLCO1C1
  • Mouse genes Slco1c1
  • Rat genes Slco1c1
  • Zfish genes slco1c1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slco1c1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0015125	bile acid transmembrane transporter activity	Slco1c1	IDA		Rat	PMID:11981753|RGD:634158
Molecular Function	GO:0008514	organic anion transmembrane transporter activity	SLCO1C1	IDA		Human	PMID:19129463
Molecular Function	GO:0015349	thyroid hormone transmembrane transporter activity	SLCO1C1	IDA		Human	PMID:12351693
Molecular Function	GO:0015349	thyroid hormone transmembrane transporter activity	SLCO1C1	IDA		Human	PMID:18566113
Cellular Component	GO:0016323	basolateral plasma membrane	SLCO1C1	IDA		Human	PMID:18687783
Cellular Component	GO:0016323	basolateral plasma membrane	Slco1c1	IDA		Mouse	MGI:MGI:6383361|PMID:18687783
Cellular Component	GO:0016323	basolateral plasma membrane	Slco1c1	IDA		Rat	PMID:18687783|RGD:15090845
Cellular Component	GO:0005886	plasma membrane	SLCO1C1	IDA		Human	PMID:23137377
Cellular Component	GO:0005886	plasma membrane	Slco1c1	IDA		Rat	PMID:18687783|RGD:15090845
Biological Process	GO:0015721	bile acid and bile salt transport	Slco1c1	IDA		Rat	PMID:11981753|RGD:634158
Biological Process	GO:2000611	positive regulation of thyroid hormone generation	SLCO1C1	IMP		Human	PMID:18566113
Biological Process	GO:0070327	thyroid hormone transport	SLCO1C1	IDA		Human	PMID:12351693
Biological Process	GO:0070327	thyroid hormone transport	SLCO1C1	IDA		Human	PMID:18566113
Biological Process	GO:0055085	transmembrane transport	SLCO1C1	IDA		Human	PMID:12351693
Biological Process	GO:0055085	transmembrane transport	SLCO1C1	IDA		Human	PMID:18566113

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern