Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SKOR1
  • Mouse genes Skor1
  • Rat genes Skor1
  • Zfish genes skor1a,skor1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Skor1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Skor1	IPI	MGI:MGI:103222	Mouse	PMID:15528197
Molecular Function	GO:0005515	protein binding	Skor1	IPI	PR:P52955	Mouse	PMID:15528197
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	SKOR1	IDA		Human	PMID:28473536
Molecular Function	GO:0046332	SMAD binding	SKOR1	IPI	UniProtKB:P84022	Human	PMID:17292623
Molecular Function	GO:0046332	SMAD binding	SKOR1	IPI	UniProtKB:Q15796	Human	PMID:17292623
Molecular Function	GO:0046332	SMAD binding	SKOR1	IPI	UniProtKB:Q15797	Human	PMID:17292623
Cellular Component	GO:0030425	dendrite	SKOR1	IDA		Human	PMID:17292623
Cellular Component	GO:0043025	neuronal cell body	SKOR1	IDA		Human	PMID:17292623
Cellular Component	GO:0005634	nucleus	Skor1	IDA		Mouse	PMID:15528197
Cellular Component	GO:0005667	transcription regulator complex	Skor1	IDA		Mouse	PMID:15528197
Biological Process	GO:0030514	negative regulation of BMP signaling pathway	SKOR1	IDA		Human	PMID:17292623
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Skor1	IDA		Mouse	PMID:15528197

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern