Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SKA1
  • Mouse genes Ska1
  • Rat genes Ska1
  • Zfish genes ska1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ska1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008017	microtubule binding	SKA1	IDA		Human	PMID:19289083
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q9UL45	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q8WVK7	Human	PMID:17093495
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q8IX90	Human	PMID:19289083
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q8WVK7	Human	PMID:19289083
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q8IX90	Human	PMID:19360002
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q8WVK7	Human	PMID:19360002
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q8N0S2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q9UL45	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:P62195	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q8IX90	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q8WVK7	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:P62195	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q8IX90	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q8IX90	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q9UL45	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:A0A1B0GWI1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:A1L4H1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:O95295	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:P62195	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q8IX90	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q8IZT9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SKA1	IPI	UniProtKB:Q9UL45	Human	PMID:32296183
Cellular Component	GO:0034451	centriolar satellite	SKA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0045171	intercellular bridge	SKA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000776	kinetochore	SKA1	IPI		Human	PMID:21633384
Cellular Component	GO:0015630	microtubule cytoskeleton	SKA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000940	outer kinetochore	SKA1	IDA		Human	PMID:17093495
Cellular Component	GO:0000940	outer kinetochore	SKA1	IDA		Human	PMID:19289083
Cellular Component	GO:0005876	spindle microtubule	SKA1	IDA		Human	PMID:17093495
Cellular Component	GO:0005876	spindle microtubule	SKA1	IDA		Human	PMID:19289083
Biological Process	GO:0051301	cell division	SKA1	IMP		Human	PMID:17093495
Biological Process	GO:0007059	chromosome segregation	SKA1	IMP		Human	PMID:19289083
Biological Process	GO:0000278	mitotic cell cycle	SKA1	IMP		Human	PMID:19289083
Biological Process	GO:0031110	regulation of microtubule polymerization or depolymerization	SKA1	IDA		Human	PMID:19289083

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern