Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SERINC1
  • Mouse genes Serinc1
  • Rat genes Serinc1
  • Zfish genes serinc1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Serinc1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019899	enzyme binding	Serinc1	IPI	UniProtKB:P38616	Rat	PMID:16120614|RGD:8553290
Molecular Function	GO:0019899	enzyme binding	Serinc1	IPI	UniProtKB:P40054	Rat	PMID:16120614|RGD:8553290
Molecular Function	GO:0005515	protein binding	SERINC1	IPI	UniProtKB:Q06710	Human	PMID:20195357
Molecular Function	GO:0005515	protein binding	SERINC1	IPI	UniProtKB:O14843	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SERINC1	IPI	UniProtKB:O15529	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SERINC1	IPI	UniProtKB:O43315	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SERINC1	IPI	UniProtKB:Q8TED1	Human	PMID:32296183
Molecular Function	GO:0030674	protein-macromolecule adaptor activity	Serinc1	IDA		Rat	PMID:16120614|RGD:8553290
Cellular Component	GO:0005789	endoplasmic reticulum membrane	Serinc1	IDA		Rat	PMID:16120614|RGD:8553290
Cellular Component	GO:0005886	plasma membrane	Serinc1	IDA		Mouse	PMID:10637174
Cellular Component	GO:0005886	plasma membrane	Serinc1	IDA		Rat	PMID:16120614|RGD:8553290
Biological Process	GO:0044091	membrane biogenesis	Serinc1	IDA		Rat	PMID:16120614|RGD:8553290
Biological Process	GO:0006658	phosphatidylserine metabolic process	Serinc1	IDA		Rat	PMID:16120614|RGD:8553290
Biological Process	GO:1904219	positive regulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity	Serinc1	IDA		Rat	PMID:16120614|RGD:8553290
Biological Process	GO:1904222	positive regulation of serine C-palmitoyltransferase activity	Serinc1	IDA		Rat	PMID:16120614|RGD:8553290
Biological Process	GO:0006665	sphingolipid metabolic process	Serinc1	IDA		Rat	PMID:16120614|RGD:8553290

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern