Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SERBP1
  • Mouse genes Serbp1
  • Rat genes Serbp1
  • Zfish genes serbp1a,serbp1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Serbp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	SERBP1	HDA		Human	PMID:25468996
Molecular Function	GO:0003730	mRNA 3'-UTR binding	SERBP1	IDA		Human	PMID:11001948
Molecular Function	GO:0005515	protein binding	SERBP1	IPI	UniProtKB:Q12873	Human	PMID:12505151
Molecular Function	GO:0005515	protein binding	SERBP1	IPI	UniProtKB:Q99873	Human	PMID:16879614
Molecular Function	GO:0005515	protein binding	SERBP1	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	SERBP1	IPI	UniProtKB:Q9NRD5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SERBP1	IPI	UniProtKB:P16284	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SERBP1	IPI	UniProtKB:P37173	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SERBP1	IPI	UniProtKB:P50454	Human	PMID:32814053
Molecular Function	GO:0043022	ribosome binding	SERBP1	IDA		Human	PMID:23636399
Molecular Function	GO:0003723	RNA binding	SERBP1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	SERBP1	HDA		Human	PMID:22681889
Molecular Function	GO:0032183	SUMO binding	SERBP1	IDA		Human	PMID:28695742
Cellular Component	GO:0005737	cytoplasm	SERBP1	IDA		Human	PMID:16879614
Cellular Component	GO:0005737	cytoplasm	Serbp1	IDA		Rat	PMID:14988380|RGD:1354690
Cellular Component	GO:0005829	cytosol	SERBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0070062	extracellular exosome	SERBP1	HDA		Human	PMID:20458337
Cellular Component	GO:0016020	membrane	SERBP1	HDA		Human	PMID:19946888
Cellular Component	GO:0005634	nucleus	SERBP1	IDA		Human	PMID:16879614
Cellular Component	GO:0005886	plasma membrane	Serbp1	IDA		Rat	PMID:14988380|RGD:1354690
Biological Process	GO:0030578	PML body organization	SERBP1	IDA		Human	PMID:28695742
Biological Process	GO:0042981	regulation of apoptotic process	Serbp1	IDA		Rat	PMID:14988380|RGD:1354690

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern