Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CRYZL2P-SEC16B,SEC16B
  • Mouse genes Sec16b
  • Rat genes Sec16b
  • Zfish genes sec16b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sec16b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SEC16B	IPI	UniProtKB:Q92734	Human	PMID:21478858
Molecular Function	GO:0005515	protein binding	SEC16B	IPI	UniProtKB:O15027	Human	PMID:22355596
Cellular Component	GO:0070971	endoplasmic reticulum exit site	SEC16B	IDA		Human	PMID:21478858
Cellular Component	GO:0070971	endoplasmic reticulum exit site	SEC16B	IDA		Human	PMID:22355596
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	SEC16B	IDA		Human	PMID:21768384
Biological Process	GO:0007029	endoplasmic reticulum organization	SEC16B	IDA		Human	PMID:21768384
Biological Process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	SEC16B	IMP		Human	PMID:21478858
Biological Process	GO:0016559	peroxisome fission	SEC16B	IMP		Human	PMID:21768384
Biological Process	GO:0007031	peroxisome organization	SEC16B	IDA		Human	PMID:21768384
Biological Process	GO:0010628	positive regulation of gene expression	SEC16B	IMP		Human	PMID:21768384
Biological Process	GO:0070863	positive regulation of protein exit from endoplasmic reticulum	SEC16B	IMP		Human	PMID:21768384

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern