Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SDF2L1
  • Mouse genes Sdf2l1
  • Rat genes Sdf2l1
  • Zfish genes sdf2l1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sdf2l1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051117	ATPase binding	Sdf2l1	IDA		Rat	PMID:23444373|RGD:8554667
Molecular Function	GO:0051787	misfolded protein binding	SDF2L1	IDA		Human	PMID:28597544
Molecular Function	GO:0051787	misfolded protein binding	Sdf2l1	IDA		Rat	PMID:23444373|RGD:8554667
Molecular Function	GO:0005515	protein binding	SDF2L1	IPI	UniProtKB:O43765	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SDF2L1	IPI	UniProtKB:Q96EQ0	Human	PMID:32296183
Molecular Function	GO:0051087	protein-folding chaperone binding	Sdf2l1	IDA		Rat	PMID:23444373|RGD:8554667
Cellular Component	GO:0005783	endoplasmic reticulum	SDF2L1	IDA		Human	PMID:28597544
Cellular Component	GO:0005783	endoplasmic reticulum	Sdf2l1	IDA		Rat	PMID:23444373|RGD:8554667
Cellular Component	GO:0034663	endoplasmic reticulum chaperone complex	Sdf2l1	IDA		Mouse	MGI:MGI:5613481|PMID:12475965
Cellular Component	GO:0016020	membrane	Sdf2l1	IDA		Rat	PMID:23444373|RGD:8554667
Cellular Component	GO:0101031	protein folding chaperone complex	SDF2L1	IPI	UniProtKB:Q9UBS4	Human	PMID:28597544
Biological Process	GO:0071218	cellular response to misfolded protein	Sdf2l1	IDA		Rat	PMID:23444373|RGD:8554667
Biological Process	GO:0051085	chaperone cofactor-dependent protein refolding	SDF2L1	IMP		Human	PMID:28597544
Biological Process	GO:0071712	ER-associated misfolded protein catabolic process	Sdf2l1	IMP		Rat	PMID:23444373|RGD:8554667
Biological Process	GO:0042981	regulation of apoptotic process	Sdf2l1	IMP		Rat	PMID:23444373|RGD:8554667
Biological Process	GO:0034976	response to endoplasmic reticulum stress	Sdf2l1	IDA		Rat	PMID:23444373|RGD:8554667

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern