Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SCRT2
  • Mouse genes Scrt2
  • Rat genes Scrt2
  • Zfish genes scrt2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Scrt2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	SCRT2	IDA		Human	PMID:28473536
Cellular Component	GO:0005634	nucleus	Scrt2	IDA		Mouse	PMID:23434913
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Scrt2	IDA		Mouse	PMID:23434913
Biological Process	GO:0043516	regulation of DNA damage response, signal transduction by p53 class mediator	scrt2	IGI	ZFIN:ZDB-MRPHLNO-070126-7,ZFIN:ZDB-MRPHLNO-110808-4	Zfish	PMID:21252910
Biological Process	GO:2000177	regulation of neural precursor cell proliferation	scrt2	IGI	ZFIN:ZDB-MRPHLNO-110808-4,ZFIN:ZDB-MRPHLNO-130412-5	Zfish	PMID:23516276
Biological Process	GO:0043523	regulation of neuron apoptotic process	scrt2	IMP	ZFIN:ZDB-MRPHLNO-110808-4	Zfish	PMID:21252910
Biological Process	GO:2001222	regulation of neuron migration	Scrt2	IMP		Mouse	PMID:23434913

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern