Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SCMH1
  • Mouse genes Scmh1
  • Rat genes Scmh1
  • Zfish genes scmh1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Scmh1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SCMH1	IPI	UniProtKB:P43365	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SCMH1	IPI	UniProtKB:Q9UMX0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SCMH1	IPI	UniProtKB:Q9UMX0-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SCMH1	IPI	UniProtKB:Q5VUG0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCMH1	IPI	UniProtKB:Q9UHJ3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCMH1	IPI	UniProtKB:Q9UM19	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Scmh1	IPI	UniProtKB:O88513	Mouse	MGI:MGI:3038045|PMID:14973489
Molecular Function	GO:0005515	protein binding	Scmh1	IPI	UniProtKB:Q64028	Mouse	MGI:MGI:1351527|PMID:10653359
Cellular Component	GO:0010369	chromocenter	Scmh1	IDA		Mouse	PMID:17215307
Cellular Component	GO:0001673	male germ cell nucleus	Scmh1	IDA		Mouse	PMID:17215307
Biological Process	GO:0009952	anterior/posterior pattern specification	Scmh1	IMP	MGI:MGI:3706668	Mouse	PMID:17215307
Biological Process	GO:0006338	chromatin remodeling	Scmh1	IMP	MGI:MGI:3706668	Mouse	PMID:17215307
Biological Process	GO:0007283	spermatogenesis	Scmh1	IGI	MGI:MGI:1860454	Mouse	PMID:17215307
Biological Process	GO:0007283	spermatogenesis	Scmh1	IMP	MGI:MGI:3706668	Mouse	PMID:17215307

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern