Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SCG3
  • Mouse genes Scg3
  • Rat genes Scg3
  • Zfish genes scg3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Scg3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SCG3	IPI	UniProtKB:O00560	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Scg3	IPI	PR:Q00493	Mouse	PMID:16219686
Molecular Function	GO:0005515	protein binding	Scg3	IPI	PR:P26339	Mouse	PMID:16219686
Molecular Function	GO:0005515	protein binding	Scg3	IPI	PR:P01193	Mouse	PMID:16219686
Molecular Function	GO:0005515	protein binding	Scg3	IPI	RGD:2338	Rat	PMID:12388744|RGD:6906913
Molecular Function	GO:0003723	RNA binding	SCG3	HDA		Human	PMID:22658674
Cellular Component	GO:0030667	secretory granule membrane	Scg3	IDA		Mouse	PMID:16219686
Biological Process	GO:0033366	protein localization to secretory granule	Scg3	IDA		Mouse	PMID:16219686

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern