Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SCAMP5
  • Mouse genes Scamp5
  • Rat genes Scamp5
  • Zfish genes scamp5a,scamp5b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Scamp5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:Q96T83	Human	PMID:15840657
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:P21579	Human	PMID:19234194
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:P46096	Human	PMID:19234194
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:P46097	Human	PMID:19234194
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:Q8N9I0	Human	PMID:19234194
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:O95470	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:P15941-11	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:P39905-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:P49638	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:P53365	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:P57054	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:Q13520	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:Q3KNW5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:Q3SXP7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:Q7Z5P4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:Q969F0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:Q96MV1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:Q99961	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:Q9HA82	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:Q9NPL8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:Q9NUH8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:Q9UKF7-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP5	IPI	UniProtKB:Q9Y320	Human	PMID:32296183
Molecular Function	GO:0044877	protein-containing complex binding	SCAMP5	IDA		Human	PMID:19234194
Cellular Component	GO:0000139	Golgi membrane	SCAMP5	IDA		Human	PMID:19234194
Cellular Component	GO:0016020	membrane	SCAMP5	IDA		Human	PMID:19234194
Cellular Component	GO:0005886	plasma membrane	SCAMP5	IDA		Human	PMID:19234194
Cellular Component	GO:0055038	recycling endosome membrane	SCAMP5	IDA		Human	PMID:15840657
Cellular Component	GO:0008021	synaptic vesicle	Scamp5	IDA		Rat	PMID:11050114|RGD:68303
Cellular Component	GO:0030672	synaptic vesicle membrane	Scamp5	IDA		Rat	PMID:11050114|RGD:68303
Cellular Component	GO:0032588	trans-Golgi network membrane	SCAMP5	IDA		Human	PMID:15840657
Biological Process	GO:0045806	negative regulation of endocytosis	SCAMP5	IDA		Human	PMID:19240033
Biological Process	GO:0045956	positive regulation of calcium ion-dependent exocytosis	SCAMP5	IDA		Human	PMID:19234194
Biological Process	GO:0001819	positive regulation of cytokine production	SCAMP5	IDA		Human	PMID:19234194
Biological Process	GO:1900242	regulation of synaptic vesicle endocytosis	Scamp5	IDA		Rat	PMID:25057210|RGD:13702419
Biological Process	GO:1900242	regulation of synaptic vesicle endocytosis	Scamp5	IMP		Rat	PMID:25057210|RGD:13702419
Biological Process	GO:0034976	response to endoplasmic reticulum stress	SCAMP5	IDA		Human	PMID:19240033

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern