Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RER1
  • Mouse genes Rer1
  • Rat genes Rer1
  • Zfish genes rer1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rer1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0033130	acetylcholine receptor binding	Rer1	IPI	PR:P04756	Mouse	PMID:20956802
Molecular Function	GO:0005515	protein binding	RER1	IPI	UniProtKB:O43516-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RER1	IPI	UniProtKB:P57086	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RER1	IPI	UniProtKB:Q17RD7	Human	PMID:32296183
Cellular Component	GO:0009986	cell surface	Rer1	IDA		Mouse	PMID:21187406
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	Rer1	IDA		Mouse	PMID:21187406
Cellular Component	GO:0005794	Golgi apparatus	RER1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000139	Golgi membrane	RER1	IDA		Human	PMID:9309388
Biological Process	GO:0060271	cilium assembly	rer1	IMP	ZFIN:ZDB-MRPHLNO-130412-1	Zfish	PMID:23479743
Biological Process	GO:0060271	cilium assembly	rer1	IMP	ZFIN:ZDB-MRPHLNO-130412-3	Zfish	PMID:23479743
Biological Process	GO:0060271	cilium assembly	rer1	IMP	ZFIN:ZDB-MRPHLNO-130412-2	Zfish	PMID:23479743
Biological Process	GO:0007528	neuromuscular junction development	Rer1	IMP	MGI:MGI:4329578	Mouse	PMID:21187406
Biological Process	GO:1903078	positive regulation of protein localization to plasma membrane	Rer1	IMP	MGI:MGI:4329578	Mouse	PMID:21187406
Biological Process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	RER1	IDA		Human	PMID:9309388
Biological Process	GO:0071340	skeletal muscle acetylcholine-gated channel clustering	Rer1	IMP	MGI:MGI:4329578	Mouse	PMID:21187406

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern